Zeba Wunderlich: search on Z-Library

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1

Hunchback is counter-repressed to regulate even-skipped stripe 2 expression in Drosophila embryos

Vincent, Ben J., Staller, Max V., Lopez-Rivera, Francheska, Bragdon, Meghan D. J., Pym, Edward C. G., Biette, Kelly M., Wunderlich, Zeba, Harden, Timothy T., Estrada, Javier, DePace, Angela H., Levine

Journal:

Year:

2018

Language:

english

File:

PDF, 7.03 MB

english, 2018

2

Analysis of Genetic Variation Indicates DNA Shape Involvement in Purifying Selection

Wang, Xiaofei, Zhou, Tianyin, Wunderlich, Zeba, Maurano, Matthew T, DePace, Angela H, Nuzhdin, Sergey V, Rohs, Remo, Ozkan, Banu

Journal:

Molecular Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 1.93 MB

english, 2018

3

Yearly Planning Meetings: Individualized Development Plans Aren’t Just More Paperwork

Vincent, Ben J., Scholes, Clarissa, Staller, Max V., Wunderlich, Zeba, Estrada, Javier, Park, Jeehae, Bragdon, Meghan D.J., Lopez Rivera, Francheska, Biette, Kelly M., DePace, Angela H.

Journal:

Year:

2015

Language:

english

File:

PDF, 850 KB

english, 2015

4

An optimized energy potential can predict SH2 domain-peptide interactions

Wunderlich, Zeba, Mirny, Leonid

Journal:

Nature Precedings

Year:

2008

File:

PDF, 1.06 MB

2008

5

Non-traditional publishing choices can enrich science

Wunderlich, Zeba, Kuchibhotla, Kishore

Journal:

Year:

2008

Language:

english

File:

PDF, 73 KB

english, 2008

6

Using the Topology of Metabolic Networks to Predict Viability of Mutant Strains

Wunderlich, Zeba, Mirny, Leonid A.

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 204 KB

english, 2006

7

Comparing mRNA levels using in situ hybridization of a target gene and co-stain

Wunderlich, Zeba, Bragdon, Meghan D., DePace, Angela H.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.08 MB

english, 2014

8

Quantitative Measurement and Thermodynamic Modeling of Fused Enhancers Support a Two-Tiered Mechanism for Interpreting Regulatory DNA

Samee, Md. Abul Hassan, Lydiard-Martin, Tara, Biette, Kelly M., Vincent, Ben J., Bragdon, Meghan D., Eckenrode, Kelly B., Wunderlich, Zeba, Estrada, Javier, Sinha, Saurabh, DePace, Angela H.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.38 MB

english, 2017

9

A Mutation in the Drosophila melanogaster eve Stripe 2 Minimal Enhancer Is Buffered by Flanking Sequences

Lopez-Rivera, Francheska, Foster Rhoades, Olivia K., Vincent, Ben J., Pym, Edward C. G., Bragdon, Meghan D. J., Estrada, Javier, DePace, Angela H., Wunderlich, Zeba

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 1.73 MB

2020

10

Assessing model accuracy using the homology modeling automatically software

Aneerban Bhattacharya, Zeba Wunderlich, Daniel Monleon, Roberto Tejero, Gaetano T. Montelione

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 472 KB

english, 2008

11

A Conserved Developmental Patterning Network Produces Quantitatively Different Output in Multiple Species of Drosophila

Fowlkes, Charless C., Eckenrode, Kelly B., Bragdon, Meghan D., Meyer, Miriah, Wunderlich, Zeba, Simirenko, Lisa, Luengo Hendriks, Cris L., Keränen, Soile V. E., Henriquez, Clara, Knowles, David W., Bi

Journal:

Year:

2011

Language:

english

File:

PDF, 8.33 MB

english, 2011

12

Fundamentally different strategies for transcriptional regulation are revealed by analysis of binding motifs

Mirny, Leonid, Wunderlich, Zeba

Journal:

Nature Precedings

Year:

2008

Language:

english

File:

PDF, 288 KB

english, 2008

13

Modeling transcriptional networks in Drosophila development at multiple scales

Zeba Wunderlich, Angela H DePace

Journal:

Current Opinion in Genetics & Development

Year:

2011

Language:

english

File:

PDF, 407 KB

english, 2011

14

Fundamentally different strategies for transcriptional regulation are revealed by analysis of binding motifs

Wunderlich, Zeba, Mirny, Leonid

Journal:

Nature Precedings

Year:

2008

Language:

english

File:

PDF, 288 KB

english, 2008

15

The protein target list of the Northeast Structural Genomics Consortium

Zeba Wunderlich, Thomas B. Acton, Jinfeng Liu, Gregory Kornhaber, John Everett, Phil Carter, Ning Lan, Nathaniel Echols, Mark Gerstein, Burkhard Rost, Gaetano T. Montelione

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 220 KB

english, 2004

16

An Enhancer's Length and Composition Are Shaped by Its Regulatory Task

Li, Lily, Wunderlich, Zeba

Journal:

Frontiers in Genetics

Year:

2017

Language:

english

File:

PDF, 3.06 MB

english, 2017

17

Different gene regulation strategies revealed by analysis of binding motifs

Zeba Wunderlich, Leonid A. Mirny

Journal:

Trends in Genetics

Year:

2009

Language:

english

File:

PDF, 700 KB

english, 2009

18

Using Topology of the Metabolic Network to Predict Viability of Mutant Strains

Zeba Wunderlich, Leonid Mirny

Journal:

Year:

2005

Language:

english

File:

PDF, 2.99 MB

english, 2005

19

Krüppel Expression Levels Are Maintained through Compensatory Evolution of Shadow Enhancers

Wunderlich, Zeba, Bragdon, Meghan D.J., Vincent, Ben J., White, Jonathan A., Estrada, Javier, DePace, Angela H.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.53 MB

english, 2015

20

Fundamentally different strategies for transcriptional regulation are revealed by analysis of binding motifs

Mirny, Leonid, Wunderlich, Zeba

Journal:

Nature Precedings

Year:

2008

File:

PDF, 288 KB

2008

21

Shadow enhancers enable Hunchback bifunctionality in the Drosophila embryo

Staller, Max V., Vincent, Ben J., Bragdon, Meghan D. J., Lydiard-Martin, Tara, Wunderlich, Zeba, Estrada, Javier, DePace, Angela H.

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 2.24 MB

english, 2015

22

Fundamentally different strategies for transcriptional regulation are revealed by analysis of binding motifs

Wunderlich, Zeba, Mirny, Leonid

Journal:

Nature Precedings

Year:

2008

File:

PDF, 288 KB

2008

23

Krüppel Expression Levels Are Maintained through Compensatory Evolution of Shadow Enhancers

Wunderlich, Zeba, Bragdon, Meghan D.J., Vincent, Ben J., White, Jonathan A., Estrada, Javier, DePace, Angela H.

Journal:

Year:

2016

Language:

english

File:

PDF, 172 KB

english, 2016

24

An optimized energy potential can predict SH2 domain-peptide interactions

Wunderlich, Zeba, Mirny, Leonid

Journal:

Nature Precedings

Year:

2008

Language:

english

File:

PDF, 1.06 MB

english, 2008

25

How a protein searches for its site on DNA: the mechanism of facilitated diffusion

Mirny, Leonid, Slutsky, Michael, Wunderlich, Zeba, Tafvizi, Anahita, Leith, Jason, Kosmrlj, Andrej

Journal:

Journal of Physics A Mathematical and Theoretical

Year:

2009

Language:

english

File:

PDF, 1.38 MB

english, 2009

26

SiteOut: An Online Tool to Design Binding Site-Free DNA Sequences

Estrada, Javier, Ruiz-Herrero, Teresa, Scholes, Clarissa, Wunderlich, Zeba, DePace, Angela H., Palsson, Arnar

Journal:

Year:

2016

Language:

english

File:

PDF, 954 KB

english, 2016

27

Dissecting sources of quantitative gene expression pattern divergence between Drosophila species

Wunderlich, Zeba, Bragdon, Meghan D, Eckenrode, Kelly B, Lydiard-Martin, Tara, Pearl-Waserman, Sivanne, DePace, Angela H

Journal:

Molecular Systems Biology

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

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